4MT5	Protein Binding	date	Sep 19, 2013
title	Crystal Structure Of Mub-Rv
authors	S.Etzold, N.Juge, A.M.Hemmings
compound		source
Molecule: Mucus Binding Proteinn Chain: A, B Fragment: Mub Repeat V (Unp Residues 1612-1794 Engineered: Yes		Organism_scientific: Lactobacillus Reuteri Organism_taxid: 927703 Strain: Atcc 53608 Gene: Mub Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: Tuner(De3)Placi2 Expression_system_vector_type: Plasmid Expression_system_plasmid: Petblue-1 Acceptor
symmetry	Space Group: C 2 2 21	R_factor 0.211 R_Free 0.269
crystal cell	length a length b length c angle alpha angle beta angle gamma 31.400 271.730 142.890 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
Primary reference	Structural basis for adaptation of lactobacilli to gastrointestinal mucus., Etzold S, Kober OI, Mackenzie DA, Tailford LE, Gunning AP, Walshaw J, Hemmings AM, Juge N, Environ Microbiol. 2014 Mar;16(3):888-903. doi: 10.1111/1462-2920.12377. Epub, 2014 Jan 23. PMID:24373178

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk] Biological Unit Coordinates (4mt5.pdb1.gz) 32 Kb Biological Unit Coordinates (4mt5.pdb2.gz) 31 Kb CSU: Contacts of Structural Units for 4MT5 Structure Factors (370 Kb) Retrieve 4MT5 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4MT5 from S2C, [Save to disk] Re-refined 4mt5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4MT5 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4MT5

Cartoon representation from PDB Cartoon Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute Crystal Contacts, from CryCo at Weizmann Institute 3D motif for 4MT5, from MSDmotif at EBI Fold representative 4mt5 from FSSP and Dali (Families of Structurally Similar Proteins)

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4mt5_B] [4mt5] [4mt5_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4MT5

Community annotation for 4MT5 at PDBWiki (http://pdbwiki.org)

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