4MUY IspH in complex with pyridin-4-ylmethyl diphosphate date
authors Span, I., Wang, K., Song, Y., Eisenreich, W., Bacher, A., Oldfield, E., Groll, M.
compound source
symmetry
R_factor
R_Free 0.22350
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand 2E5, F3S enzyme
Gene ECDH1ME8569
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceInsights into the Binding of Pyridines to the Iron-Sulfur Enzyme IspH., Span I, Wang K, Eisenreich W, Bacher A, Zhang Y, Oldfield E, Groll M, J Am Chem Soc. 2014 May 22. PMID:24813236
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (231 Kb) [Save to disk]
  • Biological Unit Coordinates (4muy.pdb1.gz) 110 Kb
  • Biological Unit Coordinates (4muy.pdb2.gz) 112 Kb
  • LPC: Ligand-Protein Contacts for 4MUY
  • CSU: Contacts of Structural Units for 4MUY
  • Structure Factors (1089 Kb)
  • Retrieve 4MUY in mmCIF format [Save to disk]
  • Re-refined 4muy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4MUY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4MUY
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4MUY, from MSDmotif at EBI
  • Fold representative 4muy from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4muy] [4muy_A] [4muy_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4MUY
  • Community annotation for 4MUY at PDBWiki (http://pdbwiki.org)

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