4NFN Human tau tubulin kinase 1 (TTBK1) complexed with 3-({5-[(4-amino-4-methylpiperidin-1-yl)methyl]pyrrolo[2,1-f][1,2,4]triazin-4-yl}amino)-5-bromophenol date 2013-10-31
authors Sheriff, S.
compound source
symmetry
R_factor
R_Free 0.2087
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.42
ligand 2KC, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe structure of human tau-tubulin kinase 1 both in the apo form and in complex with an inhibitor., Kiefer SE, Chang CJ, Kimura SR, Gao M, Xie D, Zhang Y, Zhang G, Gill MB, Mastalerz H, Thompson LA, Cacace AM, Sheriff S, Acta Crystallogr F Struct Biol Commun. 2014 Feb 1;70(Pt 2):173-81. doi:, 10.1107/S2053230X14000144. Epub 2014 Jan 21. PMID:24637750
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk]
  • Biological Unit Coordinates (4nfn.pdb1.gz) 53 Kb
  • LPC: Ligand-Protein Contacts for 4NFN
  • CSU: Contacts of Structural Units for 4NFN
  • Structure Factors (2549 Kb)
  • Retrieve 4NFN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4NFN from S2C, [Save to disk]
  • Re-refined 4nfn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4NFN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4NFN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4NFN, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nfn] [4nfn_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4NFN: [STYKc ] by SMART
    • Other resources with information on 4NFN
  • Community annotation for 4NFN at PDBWiki (http://pdbwiki.org)

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