4NMU Oxidoreductase date Nov 15, 2013
title Crystal Structure Of Thiol-Disulfide Oxidoreductase From Bac 'Ames Ancestor'
authors Y.Kim, M.Zhou, S.Shatsman, W.F.Anderson, A.Joachimiak, Center For Structural Genomics Of Infectious Diseases (Csgid)
compound source
Molecule: Thiol-Disulfide Oxidoreductase Resa
Chain: A, B, C, D
Engineered: Yes
Organism_scientific: Bacillus Anthracis
Organism_common: Anthrax,Anthrax Bacterium
Organism_taxid: 1392
Strain: Ames Ancestor
Gene: Bas1383, Ba_1494, Gbaa_1494, Resa
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3) Gold
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pmcsg53
symmetry Space Group: P 1
R_factor 0.137 R_Free 0.176
crystal
cell
length a length b length c angle alpha angle beta angle gamma
36.816 55.166 62.570 92.27 90.09 89.99
method X-Ray Diffractionresolution 1.35 Å
ligand ACY, EDO, GOL, MG, MSE, PEG enzyme
Genes BA, GBAA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (227 Kb) [Save to disk]
  • Biological Unit Coordinates (4nmu.pdb1.gz) 58 Kb
  • Biological Unit Coordinates (4nmu.pdb2.gz) 57 Kb
  • Biological Unit Coordinates (4nmu.pdb3.gz) 59 Kb
  • Biological Unit Coordinates (4nmu.pdb4.gz) 56 Kb
  • LPC: Ligand-Protein Contacts for 4NMU
  • CSU: Contacts of Structural Units for 4NMU
  • Structure Factors (1177 Kb)
  • Retrieve 4NMU in mmCIF format [Save to disk]
  • Re-refined 4nmu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4NMU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4NMU
  • Cartoon representation from PDB Cartoon
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Crystal Contacts, from CryCo at Weizmann Institute
  • 3D motif for 4NMU, from MSDmotif at EBI
  • Fold representative 4nmu from FSSP and Dali (Families of Structurally Similar Proteins)
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nmu_A] [4nmu] [4nmu_B] [4nmu_C] [4nmu_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4NMU
  • Community annotation for 4NMU at PDBWiki (http://pdbwiki.org)

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