4NP4 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Primary referenceMechanism of action and epitopes of the Clostridium difficile toxin B neutralizing antibody bezlotoxumab revealed by x-ray crystallography., Orth P, Xiao L, Hernandez LD, Reichert P, Sheth P, Beaumont M, Yang X, Murgolo N, Ermakov G, DiNunzio E, Racine F, Karczewski J, Secore S, Ingram RN, Mayhood T, Strickland C, Therien AG, J Biol Chem. 2014 May 12. pii: jbc.M114.560748. PMID:24821719
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (179 Kb) [Save to disk]
  • Biological Unit Coordinates (4np4.pdb1.gz) 174 Kb
  • CSU: Contacts of Structural Units for 4NP4
  • Structure Factors (2362 Kb)
  • Retrieve 4NP4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4NP4 from S2C, [Save to disk]
  • Re-refined 4np4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4NP4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4np4] [4np4_A] [4np4_H] [4np4_I] [4np4_L] [4np4_M]
  • SWISS-PROT database:
  • Domains found in 4NP4: [IG_like] [IGv ] by SMART

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