4NXV Crystal structure of the cytosolic domain of human MiD51 date 2013-12-09
authors Richter, V., Kvansakul, M., Ryan, M.T.
compound source
symmetry
R_factor
R_Free 0.2375
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.30
ligand GDP, GOL, SO4 enzyme
Primary referenceStructural and functional analysis of MiD51, a dynamin receptor required for mitochondrial fission., Richter V, Palmer CS, Osellame LD, Singh AP, Elgass K, Stroud DA, Sesaki H, Kvansakul M, Ryan MT, J Cell Biol. 2014 Feb 17;204(4):477-86. doi: 10.1083/jcb.201311014. Epub 2014 Feb, 10. PMID:24515348
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (660 Kb) [Save to disk]
  • Biological Unit Coordinates (4nxv.pdb1.gz) 165 Kb
  • Biological Unit Coordinates (4nxv.pdb2.gz) 165 Kb
  • Biological Unit Coordinates (4nxv.pdb3.gz) 166 Kb
  • Biological Unit Coordinates (4nxv.pdb4.gz) 164 Kb
  • Biological Unit Coordinates (4nxv.pdb5.gz) 326 Kb
  • Biological Unit Coordinates (4nxv.pdb6.gz) 329 Kb
  • LPC: Ligand-Protein Contacts for 4NXV
  • CSU: Contacts of Structural Units for 4NXV
  • Structure Factors (3778 Kb)
  • Retrieve 4NXV in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4NXV from S2C, [Save to disk]
  • Re-refined 4nxv structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4NXV in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4NXV
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4NXV, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4nxv_C] [4nxv_B] [4nxv_A] [4nxv_D] [4nxv]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4NXV: [Mab-21 ] by SMART
    • Other resources with information on 4NXV
  • Community annotation for 4NXV at PDBWiki (http://pdbwiki.org)

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