4O2A Tubulin-BAL27862 complex date
authors Prota, A.E., Franck, D., Bachmann, F., Bargsten, K., Buey, R.M., Pohlmann, J., Reinelt, S., Lane, H., Steinmetz, M.O.
compound source
symmetry
R_factor
R_Free 0.232
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.50
ligand 2RR, ADP, CA, CL, GDP, GOL, GTP, IMD, MES, MG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C


D, B


E


F


Primary referenceThe Novel Microtubule-Destabilizing Drug BAL27862 Binds to the Colchicine Site of Tubulin with Distinct Effects on Microtubule Organization., Prota AE, Danel F, Bachmann F, Bargsten K, Buey RM, Pohlmann J, Reinelt S, Lane H, Steinmetz MO, J Mol Biol. 2014 Apr 17;426(8):1848-60. doi: 10.1016/j.jmb.2014.02.005. Epub 2014, Feb 11. PMID:24530796
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (754 Kb) [Save to disk]
  • Biological Unit Coordinates (4o2a.pdb1.gz) 740 Kb
  • LPC: Ligand-Protein Contacts for 4O2A
  • CSU: Contacts of Structural Units for 4O2A
  • Structure Factors (1282 Kb)
  • Retrieve 4O2A in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4O2A from S2C, [Save to disk]
  • Re-refined 4o2a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4O2A in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4O2A
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4O2A, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4o2a_E] [4o2a_F] [4o2a] [4o2a_D] [4o2a_B] [4o2a_A] [4o2a_C]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4O2A: [Tubulin] [Tubulin_C ] by SMART
    • Other resources with information on 4O2A
  • Community annotation for 4O2A at PDBWiki (http://pdbwiki.org)

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