4O2B	Tubulin-Colchicine complex	date	2013-12-17
authors	Prota, A.E., Franck, D., Bachmann, F., Bargsten, K., Buey, R.M., Pohlmann, J., Reinelt, S., Lane, H., Steinmetz, M.O.
compound		source
symmetry		R_factor R_Free 0.213
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.30
ligand	ACP, CA, GDP, GOL, GTP, IMD, LOC, MES, MG, PEG	enzyme
Gene Ontology	Chain Function Process Component A, C D, B E F
Primary reference	The Novel Microtubule-Destabilizing Drug BAL27862 Binds to the Colchicine Site of Tubulin with Distinct Effects on Microtubule Organization., Prota AE, Danel F, Bachmann F, Bargsten K, Buey RM, Pohlmann J, Reinelt S, Lane H, Steinmetz MO, J Mol Biol. 2014 Apr 17;426(8):1848-60. doi: 10.1016/j.jmb.2014.02.005. Epub 2014, Feb 11. PMID:24530796

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (750 Kb) [Save to disk] Biological Unit Coordinates (4o2b.pdb1.gz) 738 Kb LPC: Ligand-Protein Contacts for 4O2B CSU: Contacts of Structural Units for 4O2B Structure Factors (1163 Kb) Retrieve 4O2B in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4O2B from S2C, [Save to disk] Re-refined 4o2b structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4O2B in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4O2B

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4O2B, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4o2b_F] [4o2b_B] [4o2b_D] [4o2b_A] [4o2b] [4o2b_C] [4o2b_E] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 4O2B: [Tubulin] [Tubulin_C ] by SMART

Other resources with information on 4O2B

Community annotation for 4O2B at PDBWiki (http://pdbwiki.org)

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