4O2F A peptide complexed with HLA-B*3901 date
authors Sun, M., Liu, J., Qi, J., Tefsen, B., Shi, Y., Yan, J., Gao, G.F.
compound source
symmetry
R_factor
R_Free 0.2132
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.90
Gene
Ontology
ChainFunctionProcessComponent
E, B
  • cellular response to iron io...

  • Primary referenceNalpha-terminal acetylation for T cell recognition: molecular basis of MHC class I-restricted nalpha-acetylpeptide presentation., Sun M, Liu J, Qi J, Tefsen B, Shi Y, Yan J, Gao GF, J Immunol. 2014 Jun 15;192(12):5509-19. doi: 10.4049/jimmunol.1400199. Epub 2014 , May 14. PMID:24829406
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (291 Kb) [Save to disk]
  • Biological Unit Coordinates (4o2f.pdb1.gz) 143 Kb
  • Biological Unit Coordinates (4o2f.pdb2.gz) 143 Kb
  • CSU: Contacts of Structural Units for 4O2F
  • Structure Factors (1123 Kb)
  • Retrieve 4O2F in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4O2F from S2C, [Save to disk]
  • Re-refined 4o2f structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4O2F in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4O2F
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4O2F, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4o2f_E] [4o2f] [4o2f_A] [4o2f_B] [4o2f_D] [4o2f_C] [4o2f_F]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4O2F: [IGc1 ] by SMART
  • Other resources with information on 4O2F
  • Community annotation for 4O2F at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science