4O38 Crystal structure of the human cyclin G associated kinase (GAK) date
authors Zhang, R., Hatzos-Skintges, C., Weger, A., Chaikuad, A., Eswaran, J., Fedorov, O., King, O., Delft, F.von., Bountra, C., Arrowsmith, C.H., Weigelt, J., Edwards, A., Knapp, S., Joachimiak, A., MCSG, Midwest.Center.for.Structural.Genomics., SGC, Structural.Genomics.Consortium.
compound source
symmetry
R_factor
R_Free 0.19502
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.10
ligand GOL, MSE, SIN enzyme
note 4O38 supersedes 3LL6
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (196 Kb) [Save to disk]
  • Biological Unit Coordinates (4o38.pdb1.gz) 188 Kb
  • LPC: Ligand-Protein Contacts for 4O38
  • CSU: Contacts of Structural Units for 4O38
  • Structure Factors (897 Kb)
  • Retrieve 4O38 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4O38 from S2C, [Save to disk]
  • Re-refined 4o38 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4O38 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4O38
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4O38, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4o38_B] [4o38_A] [4o38]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4O38: [STYKc ] by SMART
    • Other resources with information on 4O38
  • Community annotation for 4O38 at PDBWiki (http://pdbwiki.org)

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