4O6E	Discovery of 5,6,7,8-tetrahydropyrido[3,4-d]pyrimidine Inhibitors of Erk2	date
authors	Yin, J., Wang, W.
compound		source
symmetry		R_factor R_Free 0.2232
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.95
ligand	2SH	enzyme
Gene Ontology	Chain Function Process Component A chemical synaptic transmissi...
Primary reference	Discovery of 5,6,7,8-tetrahydropyrido[3,4-d]pyrimidine inhibitors of Erk2., Blake JF, Gaudino JJ, De Meese J, Mohr P, Chicarelli M, Tian H, Garrey R, Thomas A, Siedem CS, Welch MB, Kolakowski G, Kaus R, Burkard M, Martinson M, Chen H, Dean B, Dudley DA, Gould SE, Pacheco P, Shahidi-Latham S, Wang W, West K, Yin J, Moffat J, Schwarz JB, Bioorg Med Chem Lett. 2014 Jun 15;24(12):2635-9. doi: 10.1016/j.bmcl.2014.04.068., Epub 2014 Apr 29. PMID:24813737

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (125 Kb) [Save to disk] Biological Unit Coordinates (4o6e.pdb1.gz) 120 Kb LPC: Ligand-Protein Contacts for 4O6E CSU: Contacts of Structural Units for 4O6E Structure Factors (592 Kb) Retrieve 4O6E in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4O6E from S2C, [Save to disk] Re-refined 4o6e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4O6E in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4O6E

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4O6E, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4o6e] [4o6e_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4O6E: [S_TKc ] by SMART

Other resources with information on 4O6E

Community annotation for 4O6E at PDBWiki (http://pdbwiki.org)

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