4OBU date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand PLP enzyme
Gene RUMGNA
Gene
Ontology
ChainFunctionProcessComponent
G, F, H, E, C, A, B, U


Primary referenceDiscovery and Characterization of Gut Microbiota Decarboxylases that Can Produce the Neurotransmitter Tryptamine., Williams BB, Van Benschoten AH, Cimermancic P, Donia MS, Zimmermann M, Taketani M, Ishihara A, Kashyap PC, Fraser JS, Fischbach MA, Cell Host Microbe. 2014 Oct 8;16(4):495-503. doi: 10.1016/j.chom.2014.09.001., Epub 2014 Sep 25. PMID:25263219
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (592 Kb) [Save to disk]
  • Biological Unit Coordinates (4obu.pdb1.gz) 153 Kb
  • Biological Unit Coordinates (4obu.pdb2.gz) 152 Kb
  • Biological Unit Coordinates (4obu.pdb3.gz) 151 Kb
  • Biological Unit Coordinates (4obu.pdb4.gz) 151 Kb
  • LPC: Ligand-Protein Contacts for 4OBU
  • CSU: Contacts of Structural Units for 4OBU
  • Structure Factors (2155 Kb)
  • Retrieve 4OBU in mmCIF format [Save to disk]
  • Re-refined 4obu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4OBU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4obu] [4obu_A] [4obu_B] [4obu_C] [4obu_E] [4obu_F] [4obu_G] [4obu_H] [4obu_U]
  • SWISS-PROT database:

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