4OHD	LEOPARD Syndrome-Associated SHP2/A461T mutant	date
authors	Yu, Z.H., Zhang, R.Y., Walls, C.D., Chen, L., Zhang, S., Wu, L., Wang, L., Liu, S., Zhang, Z.Y.
compound		source
symmetry		R_factor R_Free 0.2708
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.70
Gene Ontology	Chain Function Process Component A
Primary reference	Molecular basis of gain-of-function LEOPARD syndrome-associated SHP2 mutations., Yu ZH, Zhang RY, Walls CD, Chen L, Zhang S, Wu L, Liu S, Zhang ZY, Biochemistry. 2014 Jul 1;53(25):4136-51. doi: 10.1021/bi5002695. Epub 2014 Jun, 17. PMID:24935154

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (85 Kb) [Save to disk] Biological Unit Coordinates (4ohd.pdb1.gz) 80 Kb CSU: Contacts of Structural Units for 4OHD Structure Factors (131 Kb) Retrieve 4OHD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4OHD from S2C, [Save to disk] Re-refined 4ohd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4OHD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4OHD

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4OHD, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ohd_A] [4ohd] SWISS-PROT database: Domain organization of by SWISSPFAM Domains found in 4OHD: [PTPc] [SH2 ] by SMART

Other resources with information on 4OHD

Community annotation for 4OHD at PDBWiki (http://pdbwiki.org)

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