4OY4 calcium-free CaMPARI v0.2 date
authors Fosque, B.F., Schreiter, E.R.
compound source
symmetry
R_factor
R_Free 0.23519
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.03
ligand CR8, GOL, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • ion channel binding
  • establishment of protein loc...

    • Primary referenceNeural circuits. Labeling of active neural circuits in vivo with designed calcium integrators., Fosque BF, Sun Y, Dana H, Yang CT, Ohyama T, Tadross MR, Patel R, Zlatic M, Kim DS, Ahrens MB, Jayaraman V, Looger LL, Schreiter ER, Science. 2015 Feb 13;347(6223):755-60. doi: 10.1126/science.1260922. PMID:25678659
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (64 Kb) [Save to disk]
  • Biological Unit Coordinates (4oy4.pdb1.gz) 58 Kb
  • LPC: Ligand-Protein Contacts for 4OY4
  • CSU: Contacts of Structural Units for 4OY4
  • Structure Factors (1545 Kb)
  • Retrieve 4OY4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4OY4 from S2C, [Save to disk]
  • Re-refined 4oy4 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4OY4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4OY4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4OY4, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4oy4_A] [4oy4]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4OY4: [EFh ] by SMART
    • Other resources with information on 4OY4
  • Community annotation for 4OY4 at PDBWiki (http://pdbwiki.org)

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