4OY9 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe X-ray structure of human P-cadherin EC1-EC2 in a closed conformation provides insight into the type I cadherin dimerization pathway., Dalle Vedove A, Lucarelli AP, Nardone V, Matino A, Parisini E, Acta Crystallogr F Struct Biol Commun. 2015 Apr;71(Pt 4):371-80. doi:, 10.1107/S2053230X15003878. Epub 2015 Mar 20. PMID:25849494
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (4oy9.pdb1.gz) 40 Kb
  • LPC: Ligand-Protein Contacts for 4OY9
  • CSU: Contacts of Structural Units for 4OY9
  • Structure Factors (723 Kb)
  • Retrieve 4OY9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4OY9 from S2C, [Save to disk]
  • Re-refined 4oy9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4OY9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4oy9] [4oy9_A]
  • SWISS-PROT database:
  • Domain found in 4OY9: [CA ] by SMART

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