4OYL Humicola insolens cutinase in complex with mono-ethylphosphate date
authors Dauter, Z.D., Brzozowski, A.M., Turkenburg, J.P., Wilson, K.S.
compound source
symmetry
R_factor
R_Free 0.18355
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.05
ligand MIR, OYL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceThermodynamic and structural investigation of the specific SDS binding of humicola insolens cutinase., Kold D, Dauter Z, Laustsen AK, Brzozowski AM, Turkenburg JP, Nielsen AD, Koldso H, Petersen E, Schiott B, De Maria L, Wilson KS, Svendsen A, Wimmer R, Protein Sci. 2014 May 16. doi: 10.1002/pro.2489. PMID:24832484
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (4oyl.pdb1.gz) 31 Kb
  • Biological Unit Coordinates (4oyl.pdb2.gz) 31 Kb
  • Biological Unit Coordinates (4oyl.pdb3.gz) 31 Kb
  • LPC: Ligand-Protein Contacts for 4OYL
  • CSU: Contacts of Structural Units for 4OYL
  • Structure Factors (484 Kb)
  • Retrieve 4OYL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4OYL from S2C, [Save to disk]
  • Re-refined 4oyl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4OYL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4OYL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4OYL, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4oyl_C] [4oyl] [4oyl_B] [4oyl_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4OYL: [Cutinase ] by SMART
    • Other resources with information on 4OYL
  • Community annotation for 4OYL at PDBWiki (http://pdbwiki.org)

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