OCA Atlas for 4OZG

4OZG

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CA, NAG

enzyme

Gene
Ontology

Chain	Function	Process	Component
A, C
D, B

Primary reference

T-cell receptor recognition of HLA-DQ2-gliadin complexes associated with celiac disease., Petersen J, Montserrat V, Mujico JR, Loh KL, Beringer DX, van Lummel M, Thompson A, Mearin ML, Schweizer J, Kooy-Winkelaar Y, van Bergen J, Drijfhout JW, Kan WT, La Gruta NL, Anderson RP, Reid HH, Koning F, Rossjohn J, Nat Struct Mol Biol. 2014 May;21(5):480-8. doi: 10.1038/nsmb.2817. Epub 2014 Apr , 28. PMID:24777060

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (539 Kb) [Save to disk]

Biological Unit Coordinates (4ozg.pdb1.gz) 270 Kb

Biological Unit Coordinates (4ozg.pdb2.gz) 267 Kb

LPC: Ligand-Protein Contacts for 4OZG

CSU: Contacts of Structural Units for 4OZG

Structure Factors (992 Kb)

Retrieve 4OZG in mmCIF format [Save to disk]

Re-refined 4ozg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4OZG in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ozg] [4ozg_A] [4ozg_B] [4ozg_C] [4ozg_D] [4ozg_E] [4ozg_F] [4ozg_G] [4ozg_H] [4ozg_I] [4ozg_J]

SWISS-PROT database:

Domains found in 4OZG: [IG] [IG_like] [IGc1] [IGv] [MHC_II_alpha] [MHC_II_beta ] by SMART

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