4P5T date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
Gene
Ontology
ChainFunctionProcessComponent
D, H


G, C


Primary referenceEffect of CDR3 Sequences and Distal V Gene Residues in Regulating TCR-MHC Contacts and Ligand Specificity., Stadinski BD, Trenh P, Duke B, Huseby PG, Li G, Stern LJ, Huseby ES, J Immunol. 2014 May 9. PMID:24813203
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (518 Kb) [Save to disk]
  • Biological Unit Coordinates (4p5t.pdb1.gz) 139 Kb
  • Biological Unit Coordinates (4p5t.pdb2.gz) 126 Kb
  • Biological Unit Coordinates (4p5t.pdb3.gz) 136 Kb
  • Biological Unit Coordinates (4p5t.pdb4.gz) 128 Kb
  • CSU: Contacts of Structural Units for 4P5T
  • Structure Factors (540 Kb)
  • Retrieve 4P5T in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4P5T from S2C, [Save to disk]
  • Re-refined 4p5t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4P5T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4p5t] [4p5t_A] [4p5t_B] [4p5t_C] [4p5t_D] [4p5t_E] [4p5t_F] [4p5t_G] [4p5t_H]
  • SWISS-PROT database:
  • Domains found in 4P5T: [IG_like] [IGc1] [IGv] [MHC_II_alpha] [MHC_II_beta ] by SMART

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