4PD1 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ACT, GOL enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceModulation of Gephyrin-Receptor Affinity by Multivalency., Maric HM, Kasaragod VB, Schindelin H, ACS Chem Biol. 2014 Aug 19. PMID:25137389
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (205 Kb) [Save to disk]
  • Biological Unit Coordinates (4pd1.pdb1.gz) 393 Kb
  • LPC: Ligand-Protein Contacts for 4PD1
  • CSU: Contacts of Structural Units for 4PD1
  • Structure Factors (1977 Kb)
  • Retrieve 4PD1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4PD1 from S2C, [Save to disk]
  • Re-refined 4pd1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4PD1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4pd1] [4pd1_A] [4pd1_C]
  • SWISS-PROT database:
  • Domain found in 4PD1: [MoCF_biosynth ] by SMART

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