4PHJ The Structural Basis of Differential Inhibition of Human Calpain by Indole and Phenyl alpha-Mercaptoacrylic Acids: Human unliganded protein date
authors Adams, S.E., Rizkallah, P.J., Allemann, R.K., Miller, D.J., Hallett, M.B., Robinson, E.
compound source
symmetry
R_factor
R_Free 0.19959
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.60
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe structural basis of differential inhibition of human calpain by indole and phenyl alpha-mercaptoacrylic acids., Adams SE, Rizkallah PJ, Miller DJ, Robinson EJ, Hallett MB, Allemann RK, J Struct Biol. 2014 Jul 30. pii: S1047-8477(14)00162-2. doi:, 10.1016/j.jsb.2014.07.004. PMID:25086406
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (135 Kb) [Save to disk]
  • Biological Unit Coordinates (4phj.pdb1.gz) 129 Kb
  • LPC: Ligand-Protein Contacts for 4PHJ
  • CSU: Contacts of Structural Units for 4PHJ
  • Structure Factors (2754 Kb)
  • Retrieve 4PHJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4PHJ from S2C, [Save to disk]
  • Re-refined 4phj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4PHJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4PHJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4PHJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4phj_A] [4phj] [4phj_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4PHJ: [EFh ] by SMART
  • Other resources with information on 4PHJ
  • Community annotation for 4PHJ at PDBWiki (http://pdbwiki.org)

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