4POT date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CA, EDO, GAL, IPA, NAG, NGC enzyme
Gene
Ontology
ChainFunctionProcessComponent
H, C, B, A, F, E, D, G, J, I


Primary referenceCrystallographic and glycan microarray analysis of human polyomavirus 9 VP1 identifies N-glycolyl neuraminic acid as a receptor candidate., Khan ZM, Liu Y, Neu U, Gilbert M, Ehlers B, Feizi T, Stehle T, J Virol. 2014 Jun;88(11):6100-11. doi: 10.1128/JVI.03455-13. Epub 2014 Mar 19. PMID:24648448
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (886 Kb) [Save to disk]
  • Biological Unit Coordinates (4pot.pdb1.gz) 437 Kb
  • Biological Unit Coordinates (4pot.pdb2.gz) 439 Kb
  • LPC: Ligand-Protein Contacts for 4POT
  • CSU: Contacts of Structural Units for 4POT
  • Structure Factors (1973 Kb)
  • Retrieve 4POT in mmCIF format [Save to disk]
  • Re-refined 4pot structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4POT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4pot] [4pot_A] [4pot_B] [4pot_C] [4pot_D] [4pot_E] [4pot_F] [4pot_G] [4pot_H] [4pot_I] [4pot_J]
  • SWISS-PROT database:

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