4PYD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	8CS, DTT, EDO, GOL	enzyme
Gene Ontology	Chain Function Process Component B, F, D, A, E, C
Primary reference	Mechanism of pyranopterin ring formation in molybdenum cofactor biosynthesis., Hover BM, Tonthat NK, Schumacher MA, Yokoyama K, Proc Natl Acad Sci U S A. 2015 May 19;112(20):6347-52. doi:, 10.1073/pnas.1500697112. Epub 2015 May 4. PMID:25941396

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk] Biological Unit Coordinates (4pyd.pdb1.gz) 128 Kb LPC: Ligand-Protein Contacts for 4PYD CSU: Contacts of Structural Units for 4PYD Structure Factors (177 Kb) Retrieve 4PYD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4PYD from S2C, [Save to disk] Re-refined 4pyd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4PYD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4pyd] [4pyd_A] [4pyd_B] [4pyd_C] [4pyd_D] [4pyd_E] [4pyd_F] SWISS-PROT database:

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022,2024 Bioinformatics Unit Weizmann Institute of Science

---