4Q2Q ZO1 PDZ3 in Complex with a Phage-Derived Peptide date
authors Appleton, B.A., Wiesmann, C.
compound source
symmetry
R_factor
R_Free 0.2105
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.45
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA Structural Portrait of the PDZ Domain Family., Ernst A, Appleton BA, Ivarsson Y, Zhang Y, Gfeller D, Wiesmann C, Sidhu SS, J Mol Biol. 2014 Aug 23. pii: S0022-2836(14)00431-8. doi:, 10.1016/j.jmb.2014.08.012. PMID:25158098
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (4q2q.pdb1.gz) 65 Kb
  • CSU: Contacts of Structural Units for 4Q2Q
  • Structure Factors (123 Kb)
  • Retrieve 4Q2Q in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4Q2Q from S2C, [Save to disk]
  • Re-refined 4q2q structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4Q2Q in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4Q2Q
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4Q2Q, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4q2q] [4q2q_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4Q2Q: [PDZ ] by SMART
  • Other resources with information on 4Q2Q
  • Community annotation for 4Q2Q at PDBWiki (http://pdbwiki.org)

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