4Q9T Crystal structure of Vanderwaltozyma polyspora Nup133 Beta-propeller domain date
authors Sampathkumar, P., Bonanno, J.B., Almo, S.C., NPCXstals, Nucleocytoplasmic.Transport:.a.Target.for.Cellular.Control., NYSGXRC, New.York.SGX.Research.Center.for.Structural.Genomics., NYSGRC, New.York.Structural.Genomics.Research.Consortium.
compound source
symmetry
R_factor
R_Free 0.2677
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.00
ligand MSE enzyme
Gene KPOL
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (270 Kb) [Save to disk]
  • Biological Unit Coordinates (4q9t.pdb1.gz) 134 Kb
  • Biological Unit Coordinates (4q9t.pdb2.gz) 133 Kb
  • LPC: Ligand-Protein Contacts for 4Q9T
  • CSU: Contacts of Structural Units for 4Q9T
  • Structure Factors (1289 Kb)
  • Retrieve 4Q9T in mmCIF format [Save to disk]
  • Re-refined 4q9t structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4Q9T in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4Q9T
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4Q9T, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4q9t] [4q9t_A] [4q9t_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4Q9T
  • Community annotation for 4Q9T at PDBWiki (http://pdbwiki.org)

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