4QF1 date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand CL, MES, PG4, PGE enzyme
Primary referenceAntibody light-chain-restricted recognition of the site of immune pressure in the RV144 HIV-1 vaccine trial is phylogenetically conserved., Wiehe K, Easterhoff D, Luo K, Nicely NI, Bradley T, Jaeger FH, Dennison SM, Zhang R, Lloyd KE, Stolarchuk C, Parks R, Sutherland LL, Scearce RM, Morris L, Kaewkungwal J, Nitayaphan S, Pitisuttithum P, Rerks-Ngarm S, Sinangil F, Phogat S, Michael NL, Kim JH, Kelsoe G, Montefiori DC, Tomaras GD, Bonsignori M, Santra S, Kepler TB, Alam SM, Moody MA, Liao HX, Haynes BF, Immunity. 2014 Dec 18;41(6):909-18. doi: 10.1016/j.immuni.2014.11.014. Epub 2014 , Nov 29. PMID:25526306
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (277 Kb) [Save to disk]
  • Biological Unit Coordinates (4qf1.pdb1.gz) 135 Kb
  • Biological Unit Coordinates (4qf1.pdb2.gz) 136 Kb
  • LPC: Ligand-Protein Contacts for 4QF1
  • CSU: Contacts of Structural Units for 4QF1
  • Structure Factors (721 Kb)
  • Retrieve 4QF1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4QF1 from S2C, [Save to disk]
  • Re-refined 4qf1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4QF1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4qf1] [4qf1_A] [4qf1_B] [4qf1_H] [4qf1_L]
  • SWISS-PROT database:
  • Domains found in 4QF1: [IG_like] [IGv ] by SMART

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