4QPA Crystal Structure of ERK2 in complex with 7-(1-benzyl-1H-pyrazol-4-yl)-2-(pyridin-4-yl)-5H-pyrrolo[2,3-b]pyrazine date
authors Yin, J., Wang, W.
compound source
symmetry
R_factor
R_Free 0.2526
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.85
ligand 35W, NEP enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • chemical synaptic transmissi...

    • Primary referenceFragment-based discovery of potent ERK2 pyrrolopyrazine inhibitors., Burdick DJ, Wang S, Heise C, Pan B, Drummond J, Yin J, Goeser L, Magnuson S, Blaney J, Moffat J, Wang W, Chen H, Bioorg Med Chem Lett. 2015 Nov 1;25(21):4728-32. doi: 10.1016/j.bmcl.2015.08.048., Epub 2015 Aug 22. PMID:26338362
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (243 Kb) [Save to disk]
  • Biological Unit Coordinates (4qpa.pdb1.gz) 117 Kb
  • Biological Unit Coordinates (4qpa.pdb2.gz) 122 Kb
  • LPC: Ligand-Protein Contacts for 4QPA
  • CSU: Contacts of Structural Units for 4QPA
  • Structure Factors (456 Kb)
  • Retrieve 4QPA in mmCIF format [Save to disk]
  • Re-refined 4qpa structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4QPA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4QPA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4qpa] [4qpa_B] [4qpa_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4QPA: [S_TKc ] by SMART
    • Other resources with information on 4QPA
  • Community annotation for 4QPA at PDBWiki (http://pdbwiki.org)

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