4QRR Crystal Structure of HLA B*3501-IPS in complex with a Delta-Beta TCR, clone 12 TCR date
authors Gras, S., Chabrol, E., Rossjohn, J.
compound source
symmetry
R_factor
R_Free 0.2581
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 3.00
Gene
Ontology
ChainFunctionProcessComponent
B
  • cellular response to iron io...

    • Primary referenceThe molecular bases of delta/alphabeta T cell-mediated antigen recognition., Pellicci DG, Uldrich AP, Le Nours J, Ross F, Chabrol E, Eckle SB, de Boer R, Lim RT, McPherson K, Besra G, Howell AR, Moretta L, McCluskey J, Heemskerk MH, Gras S, Rossjohn J, Godfrey DI, J Exp Med. 2014 Dec 15;211(13):2599-615. doi: 10.1084/jem.20141764. Epub 2014 Dec, 1. PMID:25452463
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (140 Kb) [Save to disk]
  • Biological Unit Coordinates (4qrr.pdb1.gz) 135 Kb
  • CSU: Contacts of Structural Units for 4QRR
  • Structure Factors (1198 Kb)
  • Retrieve 4QRR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4QRR from S2C, [Save to disk]
  • Re-refined 4qrr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4QRR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4QRR
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4QRR, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4qrr] [4qrr_A] [4qrr_B] [4qrr_D] [4qrr_P] [4qrr_E]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4QRR: [IG_like] [IGc1] [IGv ] by SMART
    • Other resources with information on 4QRR
  • Community annotation for 4QRR at PDBWiki (http://pdbwiki.org)

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