4QRY date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand BNG, BR, L2P, RET enzyme
Gene
Ontology
ChainFunctionProcessComponent
E, F, G, B, C, A


Primary referenceCrystal Structures of the L1, L2, N, and O States of pharaonis Halorhodopsin., Kouyama T, Kawaguchi H, Nakanishi T, Kubo H, Murakami M, Biophys J. 2015 Jun 2;108(11):2680-90. doi: 10.1016/j.bpj.2015.04.027. PMID:26039169
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (249 Kb) [Save to disk]
  • Biological Unit Coordinates (4qry.pdb1.gz) 121 Kb
  • Biological Unit Coordinates (4qry.pdb2.gz) 123 Kb
  • LPC: Ligand-Protein Contacts for 4QRY
  • CSU: Contacts of Structural Units for 4QRY
  • Structure Factors (650 Kb)
  • Retrieve 4QRY in mmCIF format [Save to disk]
  • Re-refined 4qry structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4QRY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4qry] [4qry_A] [4qry_B] [4qry_C] [4qry_E] [4qry_F] [4qry_G]
  • SWISS-PROT database:
  • Domain found in 4QRY: [Bac_rhodopsin ] by SMART

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