4QTL Crystal structure of human carbonic anhydrase isozyme II with inhibitor date
authors Smirnov, A., Manakova, E., Grazulis, S.
compound source
symmetry
R_factor
R_Free 0.203
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.80
ligand DMS, MES, WWO, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFunctionalization of Fluorinated Benzenesulfonamides and Their Inhibitory Properties toward Carbonic Anhydrases., Dudutiene V, Zubriene A, Smirnov A, Timm DD, Smirnoviene J, Kazokaite J, Michailoviene V, Zaksauskas A, Manakova E, Grazulis S, Matulis D, ChemMedChem. 2015 Apr;10(4):662-87. doi: 10.1002/cmdc.201402490. Epub 2015 Mar, 10. PMID:25758852
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (4qtl.pdb1.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 4QTL
  • CSU: Contacts of Structural Units for 4QTL
  • Structure Factors (761 Kb)
  • Retrieve 4QTL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4QTL from S2C, [Save to disk]
  • Re-refined 4qtl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4QTL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4QTL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4QTL, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4qtl] [4qtl_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4QTL: [Carb_anhydrase ] by SMART
    • Other resources with information on 4QTL
  • Community annotation for 4QTL at PDBWiki (http://pdbwiki.org)

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