4QYP	The Crystal Structures of holo-wt human Cellular Retinol Binding protein II (hCRBPII) bound to Retinal	date
authors	Nossoni, Z., Assar, Z., Yapici, I., Nosrati, M., Wang, W., Berbasova, T., Vasileiou, C., Borhan, B., Geiger, H.
compound		source
symmetry		R_factor R_Free 0.25245
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.62
ligand	ACT, RET	enzyme
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	Structures of holo wild-type human cellular retinol-binding protein II (hCRBPII) bound to retinol and retinal., Nossoni Z, Assar Z, Yapici I, Nosrati M, Wang W, Berbasova T, Vasileiou C, Borhan B, Geiger J, Acta Crystallogr D Biol Crystallogr. 2014 Dec 1;70(Pt 12):3226-32. doi:, 10.1107/S1399004714023839. Epub 2014 Nov 22. PMID:25478840

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (99 Kb) [Save to disk] Biological Unit Coordinates (4qyp.pdb1.gz) 24 Kb Biological Unit Coordinates (4qyp.pdb2.gz) 26 Kb Biological Unit Coordinates (4qyp.pdb3.gz) 25 Kb Biological Unit Coordinates (4qyp.pdb4.gz) 25 Kb LPC: Ligand-Protein Contacts for 4QYP CSU: Contacts of Structural Units for 4QYP Structure Factors (1130 Kb) Retrieve 4QYP in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4QYP from S2C, [Save to disk] Re-refined 4qyp structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4QYP in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4QYP

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4QYP, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4qyp_D] [4qyp_B] [4qyp_C] [4qyp_A] [4qyp] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 4QYP

Community annotation for 4QYP at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---