4R07		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	BMA, MAN, NAG, UCG, URI	enzyme
Gene Ontology	Chain Function Process Component D, C, B, A
Primary reference	Toll-like receptor 8 senses degradation products of single-stranded RNA., Tanji H, Ohto U, Shibata T, Taoka M, Yamauchi Y, Isobe T, Miyake K, Shimizu T, Nat Struct Mol Biol. 2015 Feb;22(2):109-15. doi: 10.1038/nsmb.2943. Epub 2015 Jan, 19. PMID:25599397

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (529 Kb) [Save to disk] Biological Unit Coordinates (4r07.pdb1.gz) 265 Kb Biological Unit Coordinates (4r07.pdb2.gz) 256 Kb LPC: Ligand-Protein Contacts for 4R07 CSU: Contacts of Structural Units for 4R07 Structure Factors (5124 Kb) Retrieve 4R07 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4R07 from S2C, [Save to disk] Re-refined 4r07 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4R07 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4r07] [4r07_A] [4r07_B] [4r07_C] [4r07_D] SWISS-PROT database: Domains found in 4R07: [LRR] [LRRCT] [LRR_TYP ] by SMART

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