4R3O Human Constitutive 20S Proteasome date
authors Sacchettini, J.C., Harshbarger, W.H.
compound source
symmetry
R_factor
R_Free 0.2442
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.60
Gene
Ontology
ChainFunctionProcessComponent
1, M


A, O
  • positive regulation of NF-ka...

    • D, R


    F, T


    G, U


    J, X


    K, Y


    N, 2


    P, B


    Q, C


    S, E


    V, W, H, I


    Z, L


    Primary referenceCrystal Structure of the Human 20S Proteasome in Complex with Carfilzomib., Harshbarger W, Miller C, Diedrich C, Sacchettini J, Structure. 2015 Feb 3;23(2):418-24. doi: 10.1016/j.str.2014.11.017. Epub 2015 Jan, 15. PMID:25599644
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1975 Kb) [Save to disk]
  • Biological Unit Coordinates (4r3o.pdb1.gz) 1966 Kb
  • CSU: Contacts of Structural Units for 4R3O
  • Structure Factors (3494 Kb)
  • Retrieve 4R3O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4R3O from S2C, [Save to disk]
  • Re-refined 4r3o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4R3O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4R3O
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4R3O, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4r3o_B] [4r3o_A] [4r3o_V] [4r3o_Z] [4r3o_Y] [4r3o_H] [4r3o_L] [4r3o_T] [4r3o_1] [4r3o_U] [4r3o_2] [4r3o_R] [4r3o_N] [4r3o_I] [4r3o_E] [4r3o_G] [4r3o_K] [4r3o_O] [4r3o] [4r3o_P] [4r3o_W] [4r3o_Q] [4r3o_C] [4r3o_S] [4r3o_M] [4r3o_F] [4r3o_X] [4r3o_J] [4r3o_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4R3O: [Proteasome_A_N ] by SMART
    • Other resources with information on 4R3O
  • Community annotation for 4R3O at PDBWiki (http://pdbwiki.org)

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