4R6M Crystal Structure of DNA Duplex Containing Two Consecutive Mercury-mediated Base Pairs date
authors Xu, C.Y., Yu, F., Wang, L.H., Zhao, Y., Lin, T., Fan, C.H., He, J.H.
compound source
symmetry
R_factor
R_Free 0.2405
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.36
ligand HG enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (4r6m.pdb1.gz) 9 Kb
  • Biological Unit Coordinates (4r6m.pdb2.gz) 9 Kb
  • Biological Unit Coordinates (4r6m.pdb3.gz) 9 Kb
  • LPC: Ligand-Protein Contacts for 4R6M
  • CSU: Contacts of Structural Units for 4R6M
  • Structure Factors (175 Kb)
  • Retrieve 4R6M in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4R6M from S2C, [Save to disk]
  • Re-refined 4r6m structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4R6M in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4R6M
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4r6m_A] [4r6m_E] [4r6m_C] [4r6m_F] [4r6m] [4r6m_B] [4r6m_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4R6M
  • Community annotation for 4R6M at PDBWiki (http://pdbwiki.org)

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