4RDH date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand AMP, GOL, MSE, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
D, B, A, C


Primary referenceThe Structure of Escherichia coli TcdA (Also Known As CsdL) Reveals a Novel Topology and Provides Insight into the tRNA Binding Surface Required for N-Threonylcarbamoyladenosine Dehydratase Activity., Kim S, Lee H, Park S, J Mol Biol. 2015 Jun 21. pii: S0022-2836(15)00345-9. doi:, 10.1016/j.jmb.2015.06.005. PMID:26101842
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (163 Kb) [Save to disk]
  • Biological Unit Coordinates (4rdh.pdb1.gz) 80 Kb
  • Biological Unit Coordinates (4rdh.pdb2.gz) 79 Kb
  • LPC: Ligand-Protein Contacts for 4RDH
  • CSU: Contacts of Structural Units for 4RDH
  • Structure Factors (931 Kb)
  • Retrieve 4RDH in mmCIF format [Save to disk]
  • Re-refined 4rdh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4RDH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4rdh] [4rdh_A] [4rdh_B] [4rdh_C] [4rdh_D]
  • SWISS-PROT database:

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