OCA Atlas for 4RJF

4RJF

Crystal structure of the human sliding clamp at 2.0 angstrom resolution

date

authors

Kroker, A.J., Bruning, J.B.

compound

source

symmetry

R_factor

R_Free

0.1887

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

2.01

Gene
Ontology

Chain	Function	Process	Component
A, C, E

Primary reference

p21 Exploits Residue Tyr151 as a Tether for High-Affinity PCNA Binding., Kroker AJ, Bruning JB, Biochemistry. 2015 Jun 9;54(22):3483-93. doi: 10.1021/acs.biochem.5b00241. Epub, 2015 May 27. PMID:25972089

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (166 Kb) [Save to disk]

Biological Unit Coordinates (4rjf.pdb1.gz) 161 Kb

Biological Unit Coordinates (4rjf.pdb2.gz) 160 Kb

Biological Unit Coordinates (4rjf.pdb3.gz) 163 Kb

CSU: Contacts of Structural Units for 4RJF

Structure Factors (694 Kb)

Retrieve 4RJF in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4RJF from S2C, [Save to disk]

Re-refined 4rjf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4RJF in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4RJF

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4rjf_A] [4rjf_C] [4rjf] [4rjf_E] [4rjf_D] [4rjf_F] [4rjf_B]

SWISS-PROT database:

Domain organization of by SWISSPFAM

Other resources with information on 4RJF

Community annotation for 4RJF at PDBWiki (http://pdbwiki.org)

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