4RUL date
authors
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand GOL, SO4, ZN enzyme
Gene ECDH1ME8569 ; ECDH1
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for suppression of hypernegative DNA supercoiling by E. coli topoisomerase I., Tan K, Zhou Q, Cheng B, Zhang Z, Joachimiak A, Tse-Dinh YC, Nucleic Acids Res. 2015 Dec 15;43(22):11031-46. doi: 10.1093/nar/gkv1073. Epub, 2015 Oct 20. PMID:26490962
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (277 Kb) [Save to disk]
  • Biological Unit Coordinates (4rul.pdb1.gz) 270 Kb
  • LPC: Ligand-Protein Contacts for 4RUL
  • CSU: Contacts of Structural Units for 4RUL
  • Structure Factors (837 Kb)
  • Retrieve 4RUL in mmCIF format [Save to disk]
  • Re-refined 4rul structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4RUL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4rul] [4rul_A] [4rul_B]
  • SWISS-PROT database:
  • Domains found in 4RUL: [TOP1Ac] [TOP1Bc] [TOPRIM ] by SMART

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