OCA Atlas for 4RUT

4RUT

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

BOG, COH, LM8, NAG

enzyme

Gene
Ontology

Chain	Function	Process	Component
D, B, A, C	peroxidase activity

Primary reference

13-methylarachidonic Acid is a positive allosteric modulator of endocannabinoid oxygenation by cyclooxygenase., Kudalkar SN, Nikas SP, Kingsley PJ, Xu S, Galligan JJ, Rouzer CA, Banerjee S, Ji L, Eno MR, Makriyannis A, Marnett LJ, J Biol Chem. 2015 Mar 20;290(12):7897-909. doi: 10.1074/jbc.M114.634014. Epub, 2015 Feb 2. PMID:25648895

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (777 Kb) [Save to disk]

Biological Unit Coordinates (4rut.pdb1.gz) 382 Kb

Biological Unit Coordinates (4rut.pdb2.gz) 386 Kb

LPC: Ligand-Protein Contacts for 4RUT

CSU: Contacts of Structural Units for 4RUT

Structure Factors (2524 Kb)

Retrieve 4RUT in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4RUT from S2C, [Save to disk]

Re-refined 4rut structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4RUT in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4rut_B] [4rut_C] [4rut_D] [4rut] [4rut_A]

SWISS-PROT database:

Domain found in 4RUT: [EGF ] by SMART

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