4S23 Structure of the GcpE-HMBPP complex from Thermus thermophilius date
authors Rekittke, I., Warkentin, E., Jomaa, H., Ermler, E.
compound source
symmetry
R_factor
R_Free 0.1701
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.65
ligand H6P, MES, SF4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of the GcpE-HMBPP complex from Thermus thermophilius., Rekittke I, Warkentin E, Jomaa H, Ermler U, Biochem Biophys Res Commun. 2015 Mar 6;458(2):246-50. doi:, 10.1016/j.bbrc.2015.01.088. Epub 2015 Feb 7. PMID:25660452
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (293 Kb) [Save to disk]
  • Biological Unit Coordinates (4s23.pdb1.gz) 286 Kb
  • LPC: Ligand-Protein Contacts for 4S23
  • CSU: Contacts of Structural Units for 4S23
  • Structure Factors (1580 Kb)
  • Retrieve 4S23 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4S23 from S2C, [Save to disk]
  • Re-refined 4s23 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4S23 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4S23
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4S23, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4s23_B] [4s23_A] [4s23]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4S23
  • Community annotation for 4S23 at PDBWiki (http://pdbwiki.org)

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