4TPY High throughput screening using acoustic droplet ejection to combine protein crystals and chemical libraries on crystallization plates at high density date
authors Teplitsky, E., Joshi, K., Mullen, J.D., Soares, A.S.
compound source
symmetry
R_factor
R_Free 0.17227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.30
ligand BEN, BR, CA, EDO, NA, TRS enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceHigh throughput screening using acoustic droplet ejection to combine protein crystals and chemical libraries on crystallization plates at high density., Teplitsky E, Joshi K, Ericson DL, Scalia A, Mullen JD, Sweet RM, Soares AS, J Struct Biol. 2015 Jul;191(1):49-58. doi: 10.1016/j.jsb.2015.05.006. Epub 2015, May 29. PMID:26027487
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (53 Kb) [Save to disk]
  • Biological Unit Coordinates (4tpy.pdb1.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 4TPY
  • CSU: Contacts of Structural Units for 4TPY
  • Structure Factors (2311 Kb)
  • Retrieve 4TPY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4TPY from S2C, [Save to disk]
  • Re-refined 4tpy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4TPY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4TPY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4TPY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4tpy_A] [4tpy]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4TPY: [Tryp_SPc ] by SMART
  • Other resources with information on 4TPY
  • Community annotation for 4TPY at PDBWiki (http://pdbwiki.org)

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science