OCA Atlas for 4TQO

4TQO

date

authors

compound

source

symmetry

R_factor

R_Free

crystal
cell

length a	length b	length c	angle alpha	angle beta	angle gamma

method

X-Ray Diffraction

resolution

ligand

CA, PQQ

enzyme

Gene
Ontology

Chain	Function	Process	Component
G, H, F, C, D, B, A, E
I, N, J, P, O, K, M, L

Primary reference

Structure and Protein-Protein Interactions of Methanol Dehydrogenase from Methylococcus capsulatus (Bath)., Culpepper MA, Rosenzweig AC, Biochemistry. 2014 Oct 7;53(39):6211-9. doi: 10.1021/bi500850j. Epub 2014 Sep 19. PMID:25185034

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (849 Kb) [Save to disk]

Biological Unit Coordinates (4tqo.pdb1.gz) 219 Kb

Biological Unit Coordinates (4tqo.pdb2.gz) 219 Kb

Biological Unit Coordinates (4tqo.pdb3.gz) 219 Kb

Biological Unit Coordinates (4tqo.pdb4.gz) 218 Kb

LPC: Ligand-Protein Contacts for 4TQO

CSU: Contacts of Structural Units for 4TQO

Structure Factors (3512 Kb)

Retrieve 4TQO in mmCIF format [Save to disk]

SEQRES to COORDINATES correlation for 4TQO from S2C, [Save to disk]

Re-refined 4tqo structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4TQO in 3D

Proteopedia, because life has more than 2D.

On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.

On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4tqo] [4tqo_A] [4tqo_B] [4tqo_C] [4tqo_D] [4tqo_E] [4tqo_F] [4tqo_G] [4tqo_H] [4tqo_I] [4tqo_J] [4tqo_K] [4tqo_L] [4tqo_M] [4tqo_N] [4tqo_O] [4tqo_P]

SWISS-PROT database:

Domain found in 4TQO: [PQQ ] by SMART

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