4TTB Crystal structure of homo sapiens IODOTYROSINE DEIODINASE (IYD) bound to FMN date
authors Chuenchor, W., Hu, J., Rokita, S.
compound source
symmetry
R_factor
R_Free 0.2026
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.45
ligand FMN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • iodide peroxidase activity


    • Primary referenceA Switch Between One- and Two-Electron Chemistry of the Human Flavoprotein Iodotyrosine Deiodinase is Controlled by Substrate., Hu J, Chuenchor W, Rokita SE, J Biol Chem. 2014 Nov 13. pii: jbc.M114.605964. PMID:25395621
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (138 Kb) [Save to disk]
  • Biological Unit Coordinates (4ttb.pdb1.gz) 130 Kb
  • LPC: Ligand-Protein Contacts for 4TTB
  • CSU: Contacts of Structural Units for 4TTB
  • Structure Factors (307 Kb)
  • Retrieve 4TTB in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4TTB from S2C, [Save to disk]
  • Re-refined 4ttb structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4TTB in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4TTB
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4TTB, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4ttb] [4ttb_A] [4ttb_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4TTB
  • Community annotation for 4TTB at PDBWiki (http://pdbwiki.org)

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