4TW5 Structure Of the First Two Thioredoxin Domains of Saccharomyces cerevisiae Eps1p date
authors Fass, D., Biran, S.
compound source
symmetry
R_factor
R_Free 0.2716
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.37
Gene C1Q
Primary referenceThe eps1p protein disulfide isomerase conserves classic thioredoxin superfamily amino Acid motifs but not their functional geometries., Biran S, Gat Y, Fass D, PLoS One. 2014 Dec 1;9(12):e113431. doi: 10.1371/journal.pone.0113431., eCollection 2014. PMID:25437863
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (180 Kb) [Save to disk]
  • Biological Unit Coordinates (4tw5.pdb1.gz) 175 Kb
  • CSU: Contacts of Structural Units for 4TW5
  • Structure Factors (482 Kb)
  • Retrieve 4TW5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4TW5 from S2C, [Save to disk]
  • Re-refined 4tw5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4TW5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4TW5
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4TW5, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4tw5_D] [4tw5_C] [4tw5_B] [4tw5] [4tw5_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4TW5
  • Community annotation for 4TW5 at PDBWiki (http://pdbwiki.org)

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