4U01 HCV NS3/4A serine protease in complex with 6570 date
authors Parsy, C.C., Alexandre, F.R., Brandt, G., Caillet, C., Chaves, D., Derock, M., Gloux, D., Griffon, Y., Lallos, L.B., Leroy, F., Liuzzi, M., Loi, A.G., Mayes, B., Moulat, L., Moussa, A., Chiara, M., Roques, V., Rosinovsky, E., Seifer, M., Stewart, A., Wang, J., Standring, D., Surleraux, D.
compound source
symmetry
R_factor
R_Free 0.28986
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
ligand 39W, CL, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
F, A, J, E, B, H, C, D, G


Primary referenceDiscovery and structural diversity of the hepatitis C virus NS3/4A serine protease inhibitor series leading to clinical candidate IDX320., Parsy CC, Alexandre FR, Bidau V, Bonnaterre F, Brandt G, Caillet C, Cappelle S, Chaves D, Convard T, Derock M, Gloux D, Griffon Y, Lallos LB, Leroy F, Liuzzi M, Loi AG, Moulat L, Chiara M, Rahali H, Roques V, Rosinovsky E, Savin S, Seifer M, Standring D, Surleraux D, Bioorg Med Chem Lett. 2015 Sep 5. pii: S0960-894X(15)30041-X. doi:, 10.1016/j.bmcl.2015.09.009. PMID:26410074
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (584 Kb) [Save to disk]
  • Biological Unit Coordinates (4u01.pdb1.gz) 67 Kb
  • Biological Unit Coordinates (4u01.pdb2.gz) 68 Kb
  • Biological Unit Coordinates (4u01.pdb3.gz) 68 Kb
  • Biological Unit Coordinates (4u01.pdb4.gz) 68 Kb
  • Biological Unit Coordinates (4u01.pdb5.gz) 68 Kb
  • Biological Unit Coordinates (4u01.pdb6.gz) 68 Kb
  • Biological Unit Coordinates (4u01.pdb7.gz) 68 Kb
  • Biological Unit Coordinates (4u01.pdb8.gz) 69 Kb
  • Biological Unit Coordinates (4u01.pdb9.gz) 69 Kb
  • LPC: Ligand-Protein Contacts for 4U01
  • CSU: Contacts of Structural Units for 4U01
  • Structure Factors (360 Kb)
  • Retrieve 4U01 in mmCIF format [Save to disk]
  • Re-refined 4u01 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4U01 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4U01
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4u01_K] [4u01_M] [4u01_O] [4u01_J] [4u01_N] [4u01_Q] [4u01_G] [4u01_T] [4u01_E] [4u01_P] [4u01_L] [4u01_H] [4u01_F] [4u01] [4u01_A] [4u01_C] [4u01_B] [4u01_D] [4u01_U]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4U01
  • Community annotation for 4U01 at PDBWiki (http://pdbwiki.org)

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