4U6G Crystal structure of 10E8 Fab in complex with a hydrocarbon-stapled HIV-1 gp41 MPER peptide date
authors Ofek, G., Bird, G.H., Walensky, L.D., Kwong, P.D.
compound source
symmetry
R_factor
R_Free 0.2806
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 4.20
ligand DIV, MK8 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (149 Kb) [Save to disk]
  • Biological Unit Coordinates (4u6g.pdb1.gz) 73 Kb
  • Biological Unit Coordinates (4u6g.pdb2.gz) 72 Kb
  • LPC: Ligand-Protein Contacts for 4U6G
  • CSU: Contacts of Structural Units for 4U6G
  • Structure Factors (170 Kb)
  • Retrieve 4U6G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4U6G from S2C, [Save to disk]
  • Re-refined 4u6g structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4U6G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4U6G
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4U6G, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4u6g_C] [4u6g_H] [4u6g_B] [4u6g_A] [4u6g_P] [4u6g] [4u6g_L]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domains found in 4U6G: [IG_like] [IGv ] by SMART
    • Other resources with information on 4U6G
  • Community annotation for 4U6G at PDBWiki (http://pdbwiki.org)

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