4U85 Human Pin1 with cysteine sulfinic acid 113 date
authors Li, W., Zhang, Y.
compound source
symmetry
R_factor
R_Free 0.24479
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.70
ligand 15P, CSD enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePin1 cysteine-113 oxidation inhibits its catalytic activity and cellular function in Alzheimer's disease., Chen CH, Li W, Sultana R, You MH, Kondo A, Shahpasand K, Kim BM, Luo ML, Nechama M, Lin YM, Yao Y, Lee TH, Zhou XZ, Swomley AM, Allan Butterfield D, Zhang Y, Lu KP, Neurobiol Dis. 2015 Apr;76:13-23. doi: 10.1016/j.nbd.2014.12.027. Epub 2015 Jan, 6. PMID:25576397
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk]
  • Biological Unit Coordinates (4u85.pdb1.gz) 27 Kb
  • LPC: Ligand-Protein Contacts for 4U85
  • CSU: Contacts of Structural Units for 4U85
  • Structure Factors (509 Kb)
  • Retrieve 4U85 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4U85 from S2C, [Save to disk]
  • Re-refined 4u85 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4U85 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4U85
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4U85, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4u85] [4u85_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4U85: [WW ] by SMART
  • Other resources with information on 4U85
  • Community annotation for 4U85 at PDBWiki (http://pdbwiki.org)

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