4UFD		date
authors
compound		source
symmetry		R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution
ligand	GOL, NA, NAG, PO4, S49, TYS	enzyme
Gene Ontology	Chain Function Process Component H L
Primary reference	Boosting Affinity by Correct Ligand Preorganization for the S2 Pocket of Thrombin: A Study by Isothermal Titration Calorimetry, Molecular Dynamics, and High-Resolution Crystal Structures., Ruhmann EH, Rupp M, Betz M, Heine A, Klebe G, ChemMedChem. 2016 Jan 13. doi: 10.1002/cmdc.201500531. PMID:26762840

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (111 Kb) [Save to disk] Biological Unit Coordinates (4ufd.pdb1.gz) 104 Kb LPC: Ligand-Protein Contacts for 4UFD CSU: Contacts of Structural Units for 4UFD Structure Factors (908 Kb) Retrieve 4UFD in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4UFD from S2C, [Save to disk] Re-refined 4ufd structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4UFD in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4ufd] [4ufd_H] [4ufd_I] [4ufd_L] SWISS-PROT database: Domain found in 4UFD: [Tryp_SPc ] by SMART

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