4W8D	Crystal structure of MST3 with a pyrrolopyrimidine inhibitor (PF-06454589).	date
authors	Jasti, J., Song, X., Griffor, M., Kurumbail, R.G.
compound		source
symmetry		R_factor R_Free 0.1824
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	1.77
ligand	3JA, TPO	enzyme
Gene Ontology	Chain Function Process Component A
Primary reference	Discovery and preclinical profiling of 3-[4-(morpholin-4-yl)-7H-pyrrolo[2,3-d]pyrimidin-5-yl]benzonitrile (PF-06447475), a highly potent, selective, brain penetrant, and in vivo active LRRK2 kinase inhibitor., Henderson JL, Kormos BL, Hayward MM, Coffman KJ, Jasti J, Kurumbail RG, Wager TT, Verhoest PR, Noell GS, Chen Y, Needle E, Berger Z, Steyn SJ, Houle C, Hirst WD, Galatsis P, J Med Chem. 2015 Jan 8;58(1):419-32. doi: 10.1021/jm5014055. Epub 2014 Nov 17. PMID:25353650

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (58 Kb) [Save to disk] Biological Unit Coordinates (4w8d.pdb1.gz) 53 Kb LPC: Ligand-Protein Contacts for 4W8D CSU: Contacts of Structural Units for 4W8D Structure Factors (1742 Kb) Retrieve 4W8D in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4W8D from S2C, [Save to disk] Re-refined 4w8d structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 4W8D in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4W8D

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 4W8D, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4w8d] [4w8d_A] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4W8D: [S_TKc ] by SMART

Other resources with information on 4W8D

Community annotation for 4W8D at PDBWiki (http://pdbwiki.org)

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