4WFI Crystal structure of PET-degrading cutinase Cut190 S226P mutant in Ca(2+)-free state date
authors Miyakawa, T., Mizushima, H., Ohtsuka, J., Oda, M., Kawai, F., Tanokura, M.
compound source
symmetry
R_factor
R_Free 0.1913
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.45
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis for the Ca-enhanced thermostability and activity of PET-degrading cutinase-like enzyme from Saccharomonospora viridis AHK190., Miyakawa T, Mizushima H, Ohtsuka J, Oda M, Kawai F, Tanokura M, Appl Microbiol Biotechnol. 2014 Dec 11. PMID:25492421
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (48 Kb) [Save to disk]
  • Biological Unit Coordinates (4wfi.pdb1.gz) 45 Kb
  • CSU: Contacts of Structural Units for 4WFI
  • Structure Factors (1088 Kb)
  • Retrieve 4WFI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WFI from S2C, [Save to disk]
  • Re-refined 4wfi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 4WFI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 4WFI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4WFI, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wfi] [4wfi_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 4WFI
  • Community annotation for 4WFI at PDBWiki (http://pdbwiki.org)

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