4WJN Crystal structure of SUMO1 in complex with phosphorylated PML date
authors Cappadocia, L., Mascle, X.H., Bourdeau, V., Tremblay-Belzile, S., Chaker-Margot, M., Lussier-Price, M., Wada, J., Sakaguchi, K., Aubry, M., Ferbeyre, G., Omichinski, J.G.
compound source
symmetry
R_factor
R_Free 0.1921
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.50
ligand SEP enzyme
Primary referenceStructural and Functional Characterization of the Phosphorylation-Dependent Interaction between PML and SUMO1., Cappadocia L, Mascle XH, Bourdeau V, Tremblay-Belzile S, Chaker-Margot M, Lussier-Price M, Wada J, Sakaguchi K, Aubry M, Ferbeyre G, Omichinski JG, Structure. 2014 Dec 11. pii: S0969-2126(14)00360-8. doi:, 10.1016/j.str.2014.10.015. PMID:25497731
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (4wjn.pdb1.gz) 49 Kb
  • LPC: Ligand-Protein Contacts for 4WJN
  • CSU: Contacts of Structural Units for 4WJN
  • Structure Factors (207 Kb)
  • Retrieve 4WJN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WJN from S2C, [Save to disk]
  • Re-refined 4wjn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4WJN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4WJN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4WJN, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wjn_B] [4wjn] [4wjn_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 4WJN: [UBQ ] by SMART
    • Other resources with information on 4WJN
  • Community annotation for 4WJN at PDBWiki (http://pdbwiki.org)

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