4WTI CRYSTAL STRUCTURE OF HCV NS5B GENOTYPE 2A JFH-1 ISOLATE WITH S15G E86Q E87Q C223H V321I MUTATIONS IN COMPLEX WITH RNA TEMPLATE 5'-ACGG, RNA PRIMER 5'-PCC, MN2+, AND GDP date
authors Edwards, T.E., Appleby, T.C.
compound source
symmetry
R_factor
R_Free 0.2340
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.80
ligand B3P, CL, GDP, MN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceViral replication. Structural basis for RNA replication by the hepatitis C virus polymerase., Appleby TC, Perry JK, Murakami E, Barauskas O, Feng J, Cho A, Fox D 3rd, Wetmore DR, McGrath ME, Ray AS, Sofia MJ, Swaminathan S, Edwards TE, Science. 2015 Feb 13;347(6223):771-5. doi: 10.1126/science.1259210. PMID:25678663
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (4wti.pdb1.gz) 91 Kb
  • LPC: Ligand-Protein Contacts for 4WTI
  • CSU: Contacts of Structural Units for 4WTI
  • Structure Factors (475 Kb)
  • Retrieve 4WTI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 4WTI from S2C, [Save to disk]
  • Re-refined 4wti structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 4WTI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 4WTI
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 4WTI, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [4wti_P] [4wti_T] [4wti] [4wti_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 4WTI
  • Community annotation for 4WTI at PDBWiki (http://pdbwiki.org)

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